Gene detail information of Glyur000237s00014409.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62660.1 | 4.00E-144 | galacturonosyltransferase-like 7 |
| NR | XP_004494402.1 | 0 | PREDICTED: probable galacturonosyltransferase-like 7-like isoform X1 [Cicer arietinum] |
| COG | YP_007062961.1 | 2.00E-17 | LPS:glycosyltransferase [Synechococcus sp. PCC 6312] |
| Swissprot | tr|Q8VYF4|GATL7_ARATH | 0 | Probable galacturonosyltransferase-like 7 |
| trEMBL | tr|A0A067HGL2|A0A067HGL2_CITSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:KDO87086.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00237 | 125962 | 127738 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT8 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000237s00014409.1 | PF01501.15 | Glyco_transf_8 | 74 | 330 | 1.70E-60 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.730 |
| SRR1783600 | control | 16.071 |
| SRR1783602 | moderate drought stress | 10.567 |
| SRR1811619 | moderate drought stress | 10.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.770 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.921 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.454 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.615 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.994 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.826 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 28.233 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.384 |
| SRR2967015 | Control (Tissue:root) | 28.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.896 |
| SRR9715740 | Leave | 4.638 |
| SRR9715741 | Leave | 5.066 |
| SRR9715739 | Root | 47.553 |
| SRR9715742 | Root | 28.241 |
| SRR9715743 | Root | 30.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.820 |
| SRR8749028 | MeJA induced 9h | 19.267 |
| SRR8749029 | MeJA induced 9h | 16.092 |
| SRR8749030 | Uninduced | 8.379 |
| SRR8749031 | Uninduced | 5.310 |
| SRR8749032 | Uninduced | 4.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 35.315 |
| SRR8400027 | Control-Root | 41.410 |