Gene detail information of Glyur000238s00016773.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G54050.23.00E-163high cyclic electron flow 1
NRXP_003552216.10PREDICTED: fructose-1,6-bisphosphatase, chloroplastic-like [Glycine max]
COGYP_003504247.16.00E-81inositol phosphatase/fructose-16-bisphosphatase [Denitrovibrio acetiphilus DSM 12809]
Swissprottr|Q42796|F16P1_SOYBN0Fructose-1,6-bisphosphatase, chloroplastic (Precursor)
trEMBLtr|I1N2R6|I1N2R6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G41940.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002381278916349+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03841FBP, fbp EC:3.1.3.11 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680
AMPK signaling pathwaymap04152
Insulin signaling pathwaymap04910


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0042132  fructose 1,6-bisphosphate 1-phosphatase activity

GO:0042578  phosphoric ester hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000238s00016773.1PF00316.15FBPase793765.30E-97


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.984
SRR1783600control1.999
SRR1783602moderate drought stress1.362
SRR1811619moderate drought stress1.351

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.232
DRR006520Root Summer glycyrrhizin high producing strain0.255
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.051
DRR006523Root Summer glycyrrhizin low producing strain0.291
DRR006524Root Summer glycyrrhizin low producing strain0.234
DRR006525Leaf Summer glycyrrhizin high producing strain231.626
DRR006526Leaf Summer glycyrrhizin high producing strain229.854

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.337
SRR2868004Drought Stress(Tissue:root)9.932
SRR2967015Control (Tissue:root)2.915

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave211.236
SRR9715740Leave251.802
SRR9715741Leave198.458
SRR9715739Root0.571
SRR9715742Root0.465
SRR9715743Root0.689

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.290
SRR8749028MeJA induced 9h0.541
SRR8749029MeJA induced 9h0.247
SRR8749030Uninduced0.069
SRR8749031Uninduced0.036
SRR8749032Uninduced0.130

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.603
SRR8400027Control-Root15.819

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved