Gene detail information of Glyur000238s00016786.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38040.20acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit
NRXP_004514537.10PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Cicer arietinum]
COGNP_682101.13.00E-114acetyl-CoA carboxylase carboxyltransferase subunit alpha [Thermosynechococcus elongatus BP-1]
Swissprottr|Q9LD43|ACCA_ARATH0Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic (Precursor)
trEMBLtr|E6Y6R9|E6Y6R9_ARAHY0Alpha-carboxyltransferase 2 {ECO:0000313|EMBL:ACO53621.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00238106240112478+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01962accA EC:6.4.1.2 Carbon metabolism map01200
Fatty acid metabolismmap01212
Pyruvate metabolismmap00620
Propanoate metabolismmap00640
Carbon fixation pathways in prokaryotesmap00720
Fatty acid biosynthesismap00061
Tetracycline biosynthesismap00253


Gene Ontology

biological_process

GO:0006633  fatty acid biosynthetic process


cellular_component

GO:0009317  acetyl-CoA carboxylase complex


molecular_function

GO:0003989  acetyl-CoA carboxylase activity

GO:0016874  ligase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000238s00016786.1PF03255.9ACCA902338.00E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.233
SRR1783600control27.370
SRR1783602moderate drought stress21.775
SRR1811619moderate drought stress21.964

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.530
DRR006520Root Summer glycyrrhizin high producing strain29.800
DRR006521Root Winter glycyrrhizin high producing strain17.222
DRR006522Root Winter glycyrrhizin high producing strain16.424
DRR006523Root Summer glycyrrhizin low producing strain23.575
DRR006524Root Summer glycyrrhizin low producing strain23.736
DRR006525Leaf Summer glycyrrhizin high producing strain32.359
DRR006526Leaf Summer glycyrrhizin high producing strain32.225

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)79.389
SRR2868004Drought Stress(Tissue:root)55.525
SRR2967015Control (Tissue:root)57.299

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.400
SRR9715740Leave51.552
SRR9715741Leave49.605
SRR9715739Root3.243
SRR9715742Root27.753
SRR9715743Root23.784

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.138
SRR8749028MeJA induced 9h12.055
SRR8749029MeJA induced 9h7.825
SRR8749030Uninduced7.239
SRR8749031Uninduced2.064
SRR8749032Uninduced2.311

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root81.774
SRR8400027Control-Root84.173

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved