Gene detail

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Gene detail information of Glyur000239s00017882.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G68690.1	1.00E-150	Protein kinase superfamily protein
NR	XP_003516269.1	0	PREDICTED: proline-rich receptor-like protein kinase PERK10-like [Glycine max]
COG	YP_001958461.1	2.00E-29	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9SX31\|PERK9_ARATH	0	Proline-rich receptor-like protein kinase PERK9
trEMBL	tr\|I1J6U1\|I1J6U1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G23180.1}

Sequence

Transcript Sequence

>Glyur000239s00017882.1
ATGAAGGCCACAGGTGATTTTTCAACTCAAAATCTCTTGGGTGAGGGTGGATTTGGTTGTGTGTATAAAGGGTACCTTCCTGATGGGAGAGAGGTAGCAGTCAAACAGCTGAAAATTGAAGGAGTTCAGGGTGAGAGAGAATTCAAAGCTGAAGTGCAAATTATAAGTCGCATACATCATCGCCATTTGGTTTCCTTGGTGGGATACTGTATTTCAGATAACAGAAGAATGCTTGTCTATGACTATGTCCCCAACAATACCCTTTATTTTCATCTTCATGGGGAAGGTAGGCCAGTGCTTGACTGGGAAAATCGTGTTAAAATTGCTGCTGGTGCAGCTCGAGGAATAGCTTATCTTCATGAAGACTGCAATCCTCGGATCATTCACAGGGATATCAAGTCATNAAACATTCTTTTAGATTACAACTTTGAAGCTCGAGTCTCAGATTTTGGGCTAGCCAAATTAGTTCTTGATGCAAATACACATGTAACCACACGTGTCATGGGAACTTTTGGATATGTTGCCCCTGAATACGTATCAAGTGGAAGGTTGACTCATGAGAAGTCAGATGTATATTCTTTTGGAGTCATGCTTTTGGAGCTCATTACCGGAAGGAAGCCAGTAGATATATCTCAGCCAGTAGGAGAAGAGAGTCTAGTTGAATGGGCTCGACCTTTGCTAAGTCATGCACTTGATAATGGGGGATTTGAGAGTTTGACAGATCCAAAGCTAGGAAAGAACTATGTTGAAAGTGAAATATTTTGCATGATTGAAGTTGCTGCTGCTTGTGTACAATATTCATCAACCAAAAGACCTCGCATGGGGCAGGTTGTTAGAGCTTTTGATAGCTTATCCACTTGTGACCTAACAAATGGAATGAGAGTTGGGGAAAGTGAGGCATTTGATTCAGGGAAGCAATCTGCAGAAATAAGATTATTTCATAGGATGGCATTTGGAAAACAAGATTATTATAGCTCAGAATTTTTTAGCCAGATTAGTTTGAATACATAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00239	35304	38489	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.6.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000239s00017882.1	PF00069.20	Pkinase	9	214	5.80E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.036
SRR1783600	control	0.006
SRR1783602	moderate drought stress	0.043
SRR1811619	moderate drought stress	0.069

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.163
DRR006524	Root Summer glycyrrhizin low producing strain	0.210
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.094
SRR2868004	Drought Stress(Tissue:root)	0.156
SRR2967015	Control (Tissue:root)	0.163

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.043
SRR9715740	Leave	0.000
SRR9715741	Leave	0.096
SRR9715739	Root	0.021
SRR9715742	Root	0.000
SRR9715743	Root	0.061

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.248
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.015
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.039
SRR8400027	Control-Root	0.054