Gene detail information of Glyur000239s00017888.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G30530.1 | 4.00E-29 | basic leucine-zipper 42 |
| NR | XP_003518809.1 | 6.59E-52 | PREDICTED: ocs element-binding factor 1-like [Glycine max] |
| Swissprot | tr|Q9FMC2|BZP43_ARATH | 8.00E-32 | Basic leucine zipper 43 |
| trEMBL | tr|K7K7Z2|K7K7Z2_SOYBN | 2.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G13960.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00239 | 70672 | 71262 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000239s00017888.1 | PF00170.16 | bZIP_1 | 93 | 151 | 2.00E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.953 |
| SRR1783600 | control | 1.904 |
| SRR1783602 | moderate drought stress | 1.531 |
| SRR1811619 | moderate drought stress | 1.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.427 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.946 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.087 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.969 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.650 |
| SRR2967015 | Control (Tissue:root) | 19.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.029 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.126 |
| SRR9715742 | Root | 2.250 |
| SRR9715743 | Root | 1.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.337 |
| SRR8749028 | MeJA induced 9h | 4.196 |
| SRR8749029 | MeJA induced 9h | 2.575 |
| SRR8749030 | Uninduced | 0.069 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 2.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.989 |
| SRR8400027 | Control-Root | 0.909 |