Gene detail information of Glyur000239s00017902.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G70530.13.00E-91cysteine-rich RLK (RECEPTOR-like protein kinase) 3
NRXP_007153758.13.24E-151hypothetical protein PHAVU_003G062700g [Phaseolus vulgaris]
COGYP_284821.14.00E-19protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprottr|Q9CAL2|CRK3_ARATH4.00E-109Cysteine-rich receptor-like protein kinase 3 (Precursor)
trEMBLtr|A0A061E6F1|A0A061E6F1_THECC7.00E-155Cysteine-rich RLK 3 isoform 2 {ECO:0000313|EMBL:EOY00551.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00239195406199830-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000239s00017902.1PF01657.12Stress-antifung371083.40E-09
Glyur000239s00017902.1PF01657.12Stress-antifung1131899.20E-11
Glyur000239s00017902.1PF00069.20Pkinase2303631.50E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.270
SRR1783600control2.218
SRR1783602moderate drought stress3.230
SRR1811619moderate drought stress3.271

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.665
DRR006520Root Summer glycyrrhizin high producing strain0.688
DRR006521Root Winter glycyrrhizin high producing strain0.267
DRR006522Root Winter glycyrrhizin high producing strain0.376
DRR006523Root Summer glycyrrhizin low producing strain4.817
DRR006524Root Summer glycyrrhizin low producing strain4.427
DRR006525Leaf Summer glycyrrhizin high producing strain2.941
DRR006526Leaf Summer glycyrrhizin high producing strain2.757

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.552
SRR2868004Drought Stress(Tissue:root)10.553
SRR2967015Control (Tissue:root)13.338

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.584
SRR9715740Leave1.680
SRR9715741Leave4.395
SRR9715739Root0.821
SRR9715742Root2.834
SRR9715743Root2.658

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.883
SRR8749028MeJA induced 9h12.674
SRR8749029MeJA induced 9h9.393
SRR8749030Uninduced15.201
SRR8749031Uninduced12.431
SRR8749032Uninduced14.708

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.315
SRR8400027Control-Root4.773

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved