Gene detail information of Glyur000240s00016389.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G31960.20glucan synthase-like 3
NRXP_004488455.10PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum]
Swissprottr|Q9SL03|CALS2_ARATH0Callose synthase 2
trEMBLtr|V7BX07|V7BX07_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW21091.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00240162457184781+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003843  1,3-beta-D-glucan synthase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000240s00016389.1PF04652.11DUF605431591.10E-06
Glyur000240s00016389.1PF14288.1FKS1_dom13164318.10E-42
Glyur000240s00016389.1PF02364.10Glucan_synthase102513527.10E-80
Glyur000240s00016389.1PF02364.10Glucan_synthase138116691.30E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control53.852
SRR1783600control54.091
SRR1783602moderate drought stress61.060
SRR1811619moderate drought stress60.451

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain69.613
DRR006520Root Summer glycyrrhizin high producing strain67.997
DRR006521Root Winter glycyrrhizin high producing strain48.704
DRR006522Root Winter glycyrrhizin high producing strain46.136
DRR006523Root Summer glycyrrhizin low producing strain71.136
DRR006524Root Summer glycyrrhizin low producing strain70.707
DRR006525Leaf Summer glycyrrhizin high producing strain33.280
DRR006526Leaf Summer glycyrrhizin high producing strain32.837

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)84.283
SRR2868004Drought Stress(Tissue:root)111.073
SRR2967015Control (Tissue:root)128.256

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave50.459
SRR9715740Leave66.723
SRR9715741Leave62.546
SRR9715739Root13.195
SRR9715742Root101.212
SRR9715743Root86.048

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.094
SRR8749028MeJA induced 9h47.557
SRR8749029MeJA induced 9h16.384
SRR8749030Uninduced13.743
SRR8749031Uninduced6.904
SRR8749032Uninduced9.639

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root103.542
SRR8400027Control-Root125.445

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved