Gene detail information of Glyur000241s00022768.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23490.16.00E-64cyanase
NRKHN10060.11.70E-106Cyanate hydratase [Glycine soja]
COGYP_004625890.11.00E-26cyanate lyase [Thermodesulfatator indicus DSM 15286]
Swissprottr|C6SXE1|CYNS_SOYBN6.00E-107Cyanate hydratase {ECO:0000255|HAMAP-Rule:MF_03139}
trEMBLtr|I1L7G1|I1L7G1_SOYBN6.00E-107Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_03139}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00241228330234283-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01725cynS EC:4.2.1.104 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0009439  cyanate metabolic process


molecular_function

GO:0003677  DNA binding

GO:0008824  cyanate hydratase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000241s00022768.1PF02560.9Cyanate_lyase781491.20E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control141.540
SRR1783600control143.994
SRR1783602moderate drought stress155.904
SRR1811619moderate drought stress155.561

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain139.551
DRR006520Root Summer glycyrrhizin high producing strain140.251
DRR006521Root Winter glycyrrhizin high producing strain99.255
DRR006522Root Winter glycyrrhizin high producing strain95.812
DRR006523Root Summer glycyrrhizin low producing strain183.469
DRR006524Root Summer glycyrrhizin low producing strain183.129
DRR006525Leaf Summer glycyrrhizin high producing strain91.784
DRR006526Leaf Summer glycyrrhizin high producing strain90.451

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)63.302
SRR2868004Drought Stress(Tissue:root)72.211
SRR2967015Control (Tissue:root)64.789

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave99.376
SRR9715740Leave137.024
SRR9715741Leave95.107
SRR9715739Root39.807
SRR9715742Root49.205
SRR9715743Root42.428

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.388
SRR8749028MeJA induced 9h29.799
SRR8749029MeJA induced 9h25.400
SRR8749030Uninduced30.743
SRR8749031Uninduced14.388
SRR8749032Uninduced32.907

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root71.520
SRR8400027Control-Root75.100

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved