Gene detail information of Glyur000243s00013133.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G31800.10cytochrome P450, family 97, subfamily A, polypeptide 3
NRXP_003552430.10PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic [Glycine max]
COGYP_007204762.15.00E-64cytochrome P450 [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q93VK5|LUT5_ARATH0Protein LUTEIN DEFICIENT 5, chloroplastic (Precursor)
trEMBLtr|I1N3W7|I1N3W7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G47500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00243129668135488+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP97A3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15747LUT5, CYP97A3 EC:1.14.-.- Carotenoid biosynthesis map00906


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000243s00013133.1PF00067.17p4501675707.70E-83


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.901
SRR1783600control12.459
SRR1783602moderate drought stress11.042
SRR1811619moderate drought stress11.031

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.060
DRR006520Root Summer glycyrrhizin high producing strain14.208
DRR006521Root Winter glycyrrhizin high producing strain6.864
DRR006522Root Winter glycyrrhizin high producing strain6.094
DRR006523Root Summer glycyrrhizin low producing strain23.114
DRR006524Root Summer glycyrrhizin low producing strain23.196
DRR006525Leaf Summer glycyrrhizin high producing strain73.639
DRR006526Leaf Summer glycyrrhizin high producing strain72.549

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.152
SRR2868004Drought Stress(Tissue:root)47.484
SRR2967015Control (Tissue:root)33.546

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave65.591
SRR9715740Leave109.897
SRR9715741Leave67.680
SRR9715739Root5.353
SRR9715742Root10.330
SRR9715743Root6.915

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.481
SRR8749028MeJA induced 9h3.465
SRR8749029MeJA induced 9h2.580
SRR8749030Uninduced2.893
SRR8749031Uninduced0.867
SRR8749032Uninduced1.400

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.804
SRR8400027Control-Root19.324

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved