Gene detail information of Glyur000244s00014794.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06720.17.00E-133peroxidase 2
NRXP_007162335.10hypothetical protein PHAVU_001G143300g [Phaseolus vulgaris]
Swissprottr|Q42578|PER53_ARATH6.00E-166Peroxidase 53 (Precursor)
trEMBLtr|V7CW37|V7CW37_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW34329.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002441582517756-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000244s00014794.1PF00141.18peroxidase452962.40E-73


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.963
SRR1783600control49.800
SRR1783602moderate drought stress68.937
SRR1811619moderate drought stress68.977

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.670
DRR006520Root Summer glycyrrhizin high producing strain7.389
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain5.746
DRR006524Root Summer glycyrrhizin low producing strain5.571
DRR006525Leaf Summer glycyrrhizin high producing strain1.761
DRR006526Leaf Summer glycyrrhizin high producing strain1.787

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)124.934
SRR2868004Drought Stress(Tissue:root)133.328
SRR2967015Control (Tissue:root)131.554

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.579
SRR9715740Leave2.295
SRR9715741Leave2.091
SRR9715739Root5.240
SRR9715742Root69.034
SRR9715743Root47.790

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.012
SRR8749029MeJA induced 9h0.054
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root192.755
SRR8400027Control-Root284.651

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved