Gene detail information of Glyur000244s00014816.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06800.1 | 9.00E-58 | myb-like HTH transcriptional regulator family protein |
| NR | XP_007162313.1 | 0 | hypothetical protein PHAVU_001G141600g [Phaseolus vulgaris] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 5.00E-50 | Protein PHR1-LIKE 1 |
| trEMBL | tr|I1JNJ8|I1JNJ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G29940.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00244 | 143179 | 146496 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000244s00014816.1 | PF00249.26 | Myb_DNA-binding | 253 | 302 | 5.10E-13 |
| Glyur000244s00014816.1 | PF14379.1 | Myb_CC_LHEQLE | 332 | 380 | 9.30E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.896 |
| SRR1783600 | control | 1.777 |
| SRR1783602 | moderate drought stress | 2.354 |
| SRR1811619 | moderate drought stress | 2.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.051 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.292 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.583 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.187 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.408 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.764 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.103 |
| SRR2967015 | Control (Tissue:root) | 10.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.830 |
| SRR9715740 | Leave | 1.146 |
| SRR9715741 | Leave | 0.985 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.433 |
| SRR9715743 | Root | 1.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.180 |
| SRR8749028 | MeJA induced 9h | 0.125 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.198 |
| SRR8400027 | Control-Root | 1.138 |