Gene detail information of Glyur000244s00014819.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06810.12.00E-117Mitochondrial transcription termination factor family protein
NRXP_004493712.10PREDICTED: uncharacterized protein LOC101493291 [Cicer arietinum]
trEMBLtr|G7KVB8|G7KVB8_MEDTR0Transcription termination factor family protein {ECO:0000313|EMBL:AES81460.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00244162431165285+


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000244s00014819.1PF02536.9mTERF3694932.90E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.521
SRR1783600control2.544
SRR1783602moderate drought stress2.551
SRR1811619moderate drought stress2.572

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.658
DRR006520Root Summer glycyrrhizin high producing strain2.590
DRR006521Root Winter glycyrrhizin high producing strain1.070
DRR006522Root Winter glycyrrhizin high producing strain1.054
DRR006523Root Summer glycyrrhizin low producing strain1.395
DRR006524Root Summer glycyrrhizin low producing strain1.521
DRR006525Leaf Summer glycyrrhizin high producing strain1.058
DRR006526Leaf Summer glycyrrhizin high producing strain1.007

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.487
SRR2868004Drought Stress(Tissue:root)3.671
SRR2967015Control (Tissue:root)3.534

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.130
SRR9715740Leave1.509
SRR9715741Leave1.003
SRR9715739Root0.624
SRR9715742Root1.459
SRR9715743Root1.497

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.636
SRR8749028MeJA induced 9h2.498
SRR8749029MeJA induced 9h1.377
SRR8749030Uninduced0.276
SRR8749031Uninduced0.881
SRR8749032Uninduced0.532

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.804
SRR8400027Control-Root4.185

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved