Gene detail information of Glyur000244s00014821.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42200.1 | 2.00E-46 | squamosa promoter binding protein-like 9 |
| NR | XP_003520534.1 | 0 | PREDICTED: squamosa promoter-binding-like protein 9-like isoform X1 [Glycine max] |
| Swissprot | tr|Q700W2|SPL9_ARATH | 4.00E-64 | Squamosa promoter-binding-like protein 9 |
| trEMBL | tr|K7KF17|K7KF17_SOYBN | 6.00E-179 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G29901.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00244 | 173929 | 178272 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SBP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000244s00014821.1 | PF03110.9 | SBP | 77 | 153 | 1.20E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.832 |
| SRR1783600 | control | 6.578 |
| SRR1783602 | moderate drought stress | 10.194 |
| SRR1811619 | moderate drought stress | 10.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.940 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.693 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.308 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.282 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.220 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.383 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.979 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.868 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.470 |
| SRR2967015 | Control (Tissue:root) | 7.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.857 |
| SRR9715740 | Leave | 3.236 |
| SRR9715741 | Leave | 3.318 |
| SRR9715739 | Root | 0.846 |
| SRR9715742 | Root | 3.947 |
| SRR9715743 | Root | 4.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.968 |
| SRR8749028 | MeJA induced 9h | 0.870 |
| SRR8749029 | MeJA induced 9h | 0.756 |
| SRR8749030 | Uninduced | 0.207 |
| SRR8749031 | Uninduced | 0.001 |
| SRR8749032 | Uninduced | 0.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.857 |
| SRR8400027 | Control-Root | 8.874 |