Gene detail information of Glyur000244s00014830.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06839.3 | 5.00E-134 | bZIP transcription factor family protein |
| NR | XP_007162295.1 | 0 | hypothetical protein PHAVU_001G140100g [Phaseolus vulgaris] |
| Swissprot | tr|Q41558|HBP1C_WHEAT | 4.00E-117 | Transcription factor HBP-1b(c1) (Fragment) |
| trEMBL | tr|V7CW02|V7CW02_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34289.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00244 | 223760 | 230156 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
| EAR motif-containing Proteins | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000244s00014830.1 | PF00170.16 | bZIP_1 | 231 | 260 | 6.50E-08 |
| Glyur000244s00014830.1 | PF14144.1 | DOG1 | 323 | 397 | 7.40E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.159 |
| SRR1783600 | control | 4.256 |
| SRR1783602 | moderate drought stress | 5.806 |
| SRR1811619 | moderate drought stress | 5.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.084 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.112 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.506 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.440 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.447 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.411 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.489 |
| SRR2967015 | Control (Tissue:root) | 22.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.581 |
| SRR9715740 | Leave | 0.232 |
| SRR9715741 | Leave | 0.207 |
| SRR9715739 | Root | 4.306 |
| SRR9715742 | Root | 3.946 |
| SRR9715743 | Root | 3.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.869 |
| SRR8749028 | MeJA induced 9h | 5.485 |
| SRR8749029 | MeJA induced 9h | 5.047 |
| SRR8749030 | Uninduced | 34.157 |
| SRR8749031 | Uninduced | 51.120 |
| SRR8749032 | Uninduced | 11.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.950 |
| SRR8400027 | Control-Root | 8.147 |