Gene detail information of Glyur000245s00014674.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G44170.20aldehyde dehydrogenase 3H1
NRXP_004498347.10PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform X2 [Cicer arietinum]
COGYP_007068020.15.00E-148aldehyde dehydrogenase [Calothrix sp. PCC 7507]
Swissprottr|Q70DU8|AL3H1_ARATH0Aldehyde dehydrogenase family 3 member H1
trEMBLtr|I1JFT5|I1JFT5_SOYBN0Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0024512256466+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00128ALDH EC:1.2.1.3 Glycolysis / Gluconeogenesis map00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625


Gene Ontology

biological_process

GO:0006081  cellular aldehyde metabolic process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004030  aldehyde dehydrogenase [NAD(P)+] activity

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000245s00014674.1PF00171.17Aldedh1084781.00E-80


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.205
SRR1783600control16.247
SRR1783602moderate drought stress14.232
SRR1811619moderate drought stress14.150

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.221
DRR006520Root Summer glycyrrhizin high producing strain8.054
DRR006521Root Winter glycyrrhizin high producing strain7.364
DRR006522Root Winter glycyrrhizin high producing strain7.148
DRR006523Root Summer glycyrrhizin low producing strain14.219
DRR006524Root Summer glycyrrhizin low producing strain14.008
DRR006525Leaf Summer glycyrrhizin high producing strain34.172
DRR006526Leaf Summer glycyrrhizin high producing strain34.016

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.049
SRR2868004Drought Stress(Tissue:root)41.677
SRR2967015Control (Tissue:root)41.225

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.055
SRR9715740Leave49.153
SRR9715741Leave39.448
SRR9715739Root7.754
SRR9715742Root10.989
SRR9715743Root10.272

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.584
SRR8749028MeJA induced 9h34.763
SRR8749029MeJA induced 9h17.618
SRR8749030Uninduced32.773
SRR8749031Uninduced7.674
SRR8749032Uninduced3.778

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root63.138
SRR8400027Control-Root65.056

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved