Gene detail information of Glyur000247s00015495.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74920.10aldehyde dehydrogenase 10A8
NRXP_003608928.10Betaine-aldehyde dehydrogenase [Medicago truncatula]
COGYP_004677560.10betaine aldehyde dehydrogenase 1 [Hyphomicrobium sp. MC1]
Swissprottr|Q9S795|BADH1_ARATH0Betaine aldehyde dehydrogenase 1, chloroplastic (Precursor)
trEMBLtr|G7JNS2|G7JNS2_MEDTR0NAD-dependent aldehyde dehydrogenase family protein {ECO:0000313|EMBL:AES91125.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002474908253680+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00130betB, gbsA EC:1.2.1.8 Glycine, serine and threonine metabolism map00260


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000247s00015495.1PF00171.17Aldedh234857.80E-182


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control50.758
SRR1783600control51.017
SRR1783602moderate drought stress56.894
SRR1811619moderate drought stress56.548

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain48.928
DRR006520Root Summer glycyrrhizin high producing strain48.581
DRR006521Root Winter glycyrrhizin high producing strain36.195
DRR006522Root Winter glycyrrhizin high producing strain35.258
DRR006523Root Summer glycyrrhizin low producing strain28.224
DRR006524Root Summer glycyrrhizin low producing strain28.656
DRR006525Leaf Summer glycyrrhizin high producing strain31.727
DRR006526Leaf Summer glycyrrhizin high producing strain31.390

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)143.278
SRR2868004Drought Stress(Tissue:root)147.672
SRR2967015Control (Tissue:root)144.539

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave79.945
SRR9715740Leave65.360
SRR9715741Leave95.479
SRR9715739Root62.027
SRR9715742Root73.554
SRR9715743Root73.792

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h64.913
SRR8749028MeJA induced 9h47.699
SRR8749029MeJA induced 9h47.572
SRR8749030Uninduced25.587
SRR8749031Uninduced12.433
SRR8749032Uninduced25.276

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root85.213
SRR8400027Control-Root79.685

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved