Gene detail information of Glyur000247s00015498.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48100.11.00E-61response regulator 5
NRAES91134.21.30E-112two-component response regulator ARR3-like protein [Medicago truncatula]
COGYP_526141.12.00E-13GGDEF domain [Saccharophagus degradans 2-40]
Swissprottr|Q9SB04|ARR5_ARATH1.00E-76Two-component response regulator ARR5
trEMBLtr|G7JNT1|G7JNT1_MEDTR5.00E-113Two-component response regulator ARR3-like protein {ECO:0000313|EMBL:AES91134.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002477189674394+


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000247s00015498.1PF00072.19Response_reg281487.90E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.041
SRR1783600control7.453
SRR1783602moderate drought stress2.804
SRR1811619moderate drought stress2.664

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.036
DRR006520Root Summer glycyrrhizin high producing strain40.424
DRR006521Root Winter glycyrrhizin high producing strain18.350
DRR006522Root Winter glycyrrhizin high producing strain17.607
DRR006523Root Summer glycyrrhizin low producing strain15.698
DRR006524Root Summer glycyrrhizin low producing strain15.735
DRR006525Leaf Summer glycyrrhizin high producing strain8.455
DRR006526Leaf Summer glycyrrhizin high producing strain8.323

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)59.834
SRR2868004Drought Stress(Tissue:root)54.863
SRR2967015Control (Tissue:root)96.024

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.980
SRR9715740Leave15.113
SRR9715741Leave15.022
SRR9715739Root14.800
SRR9715742Root39.972
SRR9715743Root30.506

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h52.769
SRR8749028MeJA induced 9h79.379
SRR8749029MeJA induced 9h134.089
SRR8749030Uninduced61.053
SRR8749031Uninduced104.341
SRR8749032Uninduced128.840

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.740
SRR8400027Control-Root84.295

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved