Gene detail information of Glyur000247s00015509.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G08720.24.00E-107serine/threonine protein kinase 2
NRKEH31878.10ribosomal protein S6 kinase [Medicago truncatula]
COGYP_006364000.13.00E-27two component serine/threonine-protein kinase with PASTA sensor [Modestobacter marinus]
Swissprottr|Q39030|KPK2_ARATH3.00E-137Serine/threonine-protein kinase AtPK2/AtPK19
trEMBLtr|A0A072US57|A0A072US57_MEDTR0Ribosomal protein S6 kinase {ECO:0000313|EMBL:KEH31878.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00247155381158825+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04688RPS6KB EC:2.7.11.1 ErbB signaling pathway map04012
TGF-beta signaling pathwaymap04350
HIF-1 signaling pathwaymap04066
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Fc gamma R-mediated phagocytosismap04666
Insulin signaling pathwaymap04910
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - wormmap04212
Longevity regulating pathway - multiple speciesmap04213
Choline metabolism in cancermap05231
Proteoglycans in cancermap05205
Acute myeloid leukemiamap05221
Breast cancermap05224
Insulin resistancemap04931
EGFR tyrosine kinase inhibitor resistancemap01521
Endocrine resistancemap01522


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000247s00015509.1PF00069.20Pkinase1353251.20E-55
Glyur000247s00015509.1PF00433.19Pkinase_C3483864.50E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.565
SRR1783600control14.792
SRR1783602moderate drought stress22.871
SRR1811619moderate drought stress23.308

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.182
DRR006520Root Summer glycyrrhizin high producing strain24.551
DRR006521Root Winter glycyrrhizin high producing strain33.514
DRR006522Root Winter glycyrrhizin high producing strain32.955
DRR006523Root Summer glycyrrhizin low producing strain65.483
DRR006524Root Summer glycyrrhizin low producing strain65.424
DRR006525Leaf Summer glycyrrhizin high producing strain20.896
DRR006526Leaf Summer glycyrrhizin high producing strain20.638

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.974
SRR2868004Drought Stress(Tissue:root)21.389
SRR2967015Control (Tissue:root)28.814

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave99.504
SRR9715740Leave43.170
SRR9715741Leave105.179
SRR9715739Root46.455
SRR9715742Root103.998
SRR9715743Root93.894

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.568
SRR8749028MeJA induced 9h10.055
SRR8749029MeJA induced 9h8.952
SRR8749030Uninduced11.873
SRR8749031Uninduced15.250
SRR8749032Uninduced12.683

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.655
SRR8400027Control-Root24.394

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved