Gene detail information of Glyur000247s00015512.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G62610.12.00E-61basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NRXP_003549652.15.73E-118PREDICTED: transcription factor bHLH79-like [Glycine max]
Swissprottr|Q9LV17|BH079_ARATH4.00E-76Transcription factor bHLH79
trEMBLtr|I1MTN2|I1MTN2_SOYBN2.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G10290.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00247177359180425-


Gene family

Gene familysubfamily
Transcription Factors FamilybHLH


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000247s00015512.1PF00010.21HLH1291762.40E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.358
SRR1783600control21.465
SRR1783602moderate drought stress32.182
SRR1811619moderate drought stress31.157

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.590
DRR006520Root Summer glycyrrhizin high producing strain23.486
DRR006521Root Winter glycyrrhizin high producing strain2.637
DRR006522Root Winter glycyrrhizin high producing strain2.486
DRR006523Root Summer glycyrrhizin low producing strain26.883
DRR006524Root Summer glycyrrhizin low producing strain25.668
DRR006525Leaf Summer glycyrrhizin high producing strain14.666
DRR006526Leaf Summer glycyrrhizin high producing strain14.712

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.052
SRR2868004Drought Stress(Tissue:root)19.760
SRR2967015Control (Tissue:root)22.748

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.421
SRR9715740Leave16.608
SRR9715741Leave18.432
SRR9715739Root8.485
SRR9715742Root14.127
SRR9715743Root13.457

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.638
SRR8749028MeJA induced 9h4.543
SRR8749029MeJA induced 9h2.883
SRR8749030Uninduced1.830
SRR8749031Uninduced0.172
SRR8749032Uninduced0.767

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.607
SRR8400027Control-Root17.706

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved