Gene detail information of Glyur000248s00011303.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28540.10casein kinase I-like 6
NRKHN48927.10Casein kinase I isoform delta-like [Glycine soja]
COGYP_632759.12.00E-15serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH7.00E-179Casein kinase I isoform delta-like
trEMBLtr|I1LYM5|I1LYM5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G18690.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002484612752327-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000248s00011303.1PF00069.20Pkinase92552.40E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.377
SRR1783600control29.423
SRR1783602moderate drought stress23.640
SRR1811619moderate drought stress23.467

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.795
DRR006520Root Summer glycyrrhizin high producing strain46.559
DRR006521Root Winter glycyrrhizin high producing strain37.254
DRR006522Root Winter glycyrrhizin high producing strain35.913
DRR006523Root Summer glycyrrhizin low producing strain41.529
DRR006524Root Summer glycyrrhizin low producing strain41.460
DRR006525Leaf Summer glycyrrhizin high producing strain26.144
DRR006526Leaf Summer glycyrrhizin high producing strain25.983

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.701
SRR2868004Drought Stress(Tissue:root)51.607
SRR2967015Control (Tissue:root)46.531

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.697
SRR9715740Leave24.040
SRR9715741Leave31.356
SRR9715739Root8.876
SRR9715742Root21.483
SRR9715743Root20.599

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.060
SRR8749028MeJA induced 9h30.942
SRR8749029MeJA induced 9h26.121
SRR8749030Uninduced22.310
SRR8749031Uninduced25.315
SRR8749032Uninduced19.032

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.757
SRR8400027Control-Root47.760

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved