Gene detail information of Glyur000248s00011307.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G20470.10AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NRXP_006594030.10PREDICTED: probable serine/threonine-protein kinase ndrA-like isoform X1 [Glycine max]
COGYP_001511011.11.00E-25WD-40 repeat-containing serine/threonin protein kinase [Frankia sp. EAN1pec]
Swissprottr|F4J6F6|IREH1_ARATH5.00E-81Probable serine/threonine protein kinase IREH1 {ECO:0000305}
trEMBLtr|I1LYM3|I1LYM3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G18670.5}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002486109369477-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000248s00011307.3PF00069.20Pkinase1194175.50E-62
Glyur000248s00011307.3PF00433.19Pkinase_C4364832.10E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.244
SRR1783600control5.244
SRR1783602moderate drought stress6.151
SRR1811619moderate drought stress6.222

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.708
DRR006520Root Summer glycyrrhizin high producing strain8.506
DRR006521Root Winter glycyrrhizin high producing strain16.959
DRR006522Root Winter glycyrrhizin high producing strain15.809
DRR006523Root Summer glycyrrhizin low producing strain13.173
DRR006524Root Summer glycyrrhizin low producing strain12.531
DRR006525Leaf Summer glycyrrhizin high producing strain14.148
DRR006526Leaf Summer glycyrrhizin high producing strain13.874

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.033
SRR2868004Drought Stress(Tissue:root)24.012
SRR2967015Control (Tissue:root)21.200

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.588
SRR9715740Leave18.093
SRR9715741Leave28.803
SRR9715739Root2.209
SRR9715742Root8.495
SRR9715743Root7.495

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.846
SRR8749028MeJA induced 9h15.578
SRR8749029MeJA induced 9h10.555
SRR8749030Uninduced13.061
SRR8749031Uninduced21.997
SRR8749032Uninduced13.901

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.965
SRR8400027Control-Root21.477

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved