Gene detail information of Glyur000249s00015868.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G04980.11.00E-177PDI-like 2-2
NRXP_004491086.10PREDICTED: protein disulfide isomerase-like 2-3-like [Cicer arietinum]
COGNP_622856.17.00E-26thiol-disulfide isomerase [Thermoanaerobacter tengcongensis MB4]
Swissprottr|Q67UF5|PDI23_ORYSJ0Protein disulfide isomerase-like 2-3 (Precursor)
trEMBLtr|I3SS06|I3SS06_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK43048.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002499452898797-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09584PDIA6, TXNDC7 EC:5.3.4.1 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis


molecular_function

GO:0016853  isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000249s00015868.1PF00085.15Thioredoxin331328.60E-31
Glyur000249s00015868.1PF00085.15Thioredoxin1632604.60E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.897
SRR1783600control17.091
SRR1783602moderate drought stress11.218
SRR1811619moderate drought stress11.261

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain39.655
DRR006520Root Summer glycyrrhizin high producing strain39.173
DRR006521Root Winter glycyrrhizin high producing strain17.537
DRR006522Root Winter glycyrrhizin high producing strain17.200
DRR006523Root Summer glycyrrhizin low producing strain31.451
DRR006524Root Summer glycyrrhizin low producing strain31.716
DRR006525Leaf Summer glycyrrhizin high producing strain12.904
DRR006526Leaf Summer glycyrrhizin high producing strain12.700

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)109.015
SRR2868004Drought Stress(Tissue:root)63.014
SRR2967015Control (Tissue:root)62.688

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.075
SRR9715740Leave23.578
SRR9715741Leave30.295
SRR9715739Root15.384
SRR9715742Root26.402
SRR9715743Root24.083

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h74.838
SRR8749028MeJA induced 9h45.764
SRR8749029MeJA induced 9h43.452
SRR8749030Uninduced31.616
SRR8749031Uninduced39.447
SRR8749032Uninduced31.845

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root54.354
SRR8400027Control-Root53.759

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved