Gene detail information of Glyur000250s00014095.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G57700.10Protein kinase superfamily protein
NRXP_003539386.10PREDICTED: probable serine/threonine-protein kinase At1g09600-like isoform X1 [Glycine max]
COGYP_007134079.17.00E-22serine/threonine protein kinase [Stanieria cyanosphaera PCC 7437]
Swissprottr|F4I114|Y1960_ARATH0Probable serine/threonine-protein kinase At1g09600
trEMBLtr|K7LVB0|K7LVB0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G28651.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002503822243865-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000250s00014095.1PF00069.20Pkinase1754546.90E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.026
SRR1783600control2.011
SRR1783602moderate drought stress1.723
SRR1811619moderate drought stress1.713

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.438
DRR006520Root Summer glycyrrhizin high producing strain2.338
DRR006521Root Winter glycyrrhizin high producing strain1.425
DRR006522Root Winter glycyrrhizin high producing strain1.436
DRR006523Root Summer glycyrrhizin low producing strain1.077
DRR006524Root Summer glycyrrhizin low producing strain1.052
DRR006525Leaf Summer glycyrrhizin high producing strain3.400
DRR006526Leaf Summer glycyrrhizin high producing strain3.463

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.797
SRR2868004Drought Stress(Tissue:root)6.572
SRR2967015Control (Tissue:root)5.945

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.637
SRR9715740Leave1.861
SRR9715741Leave1.006
SRR9715739Root0.353
SRR9715742Root1.989
SRR9715743Root2.123

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.512
SRR8749028MeJA induced 9h1.866
SRR8749029MeJA induced 9h1.361
SRR8749030Uninduced1.486
SRR8749031Uninduced0.856
SRR8749032Uninduced0.777

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.713
SRR8400027Control-Root10.230

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved