Gene detail information of Glyur000250s00014098.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10240.1 | 0 | FAR1-related sequence 11 |
| NR | XP_006588528.1 | 0 | PREDICTED: protein FAR1-RELATED SEQUENCE 11-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9SY66|FRS11_ARATH | 0 | Protein FAR1-RELATED SEQUENCE 11 |
| trEMBL | tr|I1L7C4|I1L7C4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G00380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00250 | 54770 | 58407 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000250s00014098.1 | PF03101.10 | FAR1 | 63 | 156 | 1.40E-18 |
| Glyur000250s00014098.1 | PF10551.4 | MULE | 290 | 373 | 1.50E-12 |
| Glyur000250s00014098.1 | PF04434.12 | SWIM | 561 | 587 | 7.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.889 |
| SRR1783600 | control | 6.887 |
| SRR1783602 | moderate drought stress | 10.300 |
| SRR1811619 | moderate drought stress | 10.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.324 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.752 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.803 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.315 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.544 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.390 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.678 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.540 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.693 |
| SRR2967015 | Control (Tissue:root) | 14.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.470 |
| SRR9715740 | Leave | 7.601 |
| SRR9715741 | Leave | 6.574 |
| SRR9715739 | Root | 2.751 |
| SRR9715742 | Root | 5.829 |
| SRR9715743 | Root | 5.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.322 |
| SRR8749028 | MeJA induced 9h | 21.488 |
| SRR8749029 | MeJA induced 9h | 13.702 |
| SRR8749030 | Uninduced | 13.865 |
| SRR8749031 | Uninduced | 14.454 |
| SRR8749032 | Uninduced | 11.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.263 |
| SRR8400027 | Control-Root | 12.038 |