Gene detail information of Glyur000250s00014115.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G59750.40auxin response factor 1
NRXP_003592874.10Auxin response factor [Medicago truncatula]
Swissprottr|Q8L7G0|ARFA_ARATH0Auxin response factor 1
trEMBLtr|G7IL56|G7IL56_MEDTR0Auxin response factor {ECO:0000256|RuleBase:RU004561}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00250153576160853-


Gene family

Gene familysubfamily
Transcription Factors FamilyARF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0009725  response to hormone


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000250s00014115.1PF02362.16B31872531.80E-14
Glyur000250s00014115.1PF06507.8Auxin_resp2793614.60E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.986
SRR1783600control32.470
SRR1783602moderate drought stress43.487
SRR1811619moderate drought stress43.822

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.627
DRR006520Root Summer glycyrrhizin high producing strain41.076
DRR006521Root Winter glycyrrhizin high producing strain32.836
DRR006522Root Winter glycyrrhizin high producing strain31.344
DRR006523Root Summer glycyrrhizin low producing strain43.204
DRR006524Root Summer glycyrrhizin low producing strain42.814
DRR006525Leaf Summer glycyrrhizin high producing strain15.165
DRR006526Leaf Summer glycyrrhizin high producing strain15.267

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.584
SRR2868004Drought Stress(Tissue:root)54.919
SRR2967015Control (Tissue:root)58.040

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.590
SRR9715740Leave29.853
SRR9715741Leave29.810
SRR9715739Root44.066
SRR9715742Root51.018
SRR9715743Root47.141

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.234
SRR8749028MeJA induced 9h29.008
SRR8749029MeJA induced 9h18.635
SRR8749030Uninduced16.448
SRR8749031Uninduced13.649
SRR8749032Uninduced14.014

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root66.506
SRR8400027Control-Root63.866

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved