Gene detail information of Glyur000250s00014126.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G49810.10methionine S-methyltransferase
NRXP_004485406.10PREDICTED: methionine S-methyltransferase-like isoform X2 [Cicer arietinum]
COGYP_005367739.12.00E-71putative S-adenosyl-L-methionine: L-methionine S-methyltransferase [Corallococcus coralloides DSM 2259]
Swissprottr|Q9LTB2|MMT1_ARATH0Methionine S-methyltransferase
trEMBLtr|G7IL50|G7IL50_MEDTR0Methionine S-methyltransferase {ECO:0000313|EMBL:AES63119.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00250216474227760-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08247E2.1.1.12 EC:2.1.1.12 Selenocompound metabolism map00450


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0008168  methyltransferase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000250s00014126.1PF12847.2Methyltransf_181152166.80E-08
Glyur000250s00014126.1PF00155.16Aminotran_1_272710751.10E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.837
SRR1783600control21.126
SRR1783602moderate drought stress20.112
SRR1811619moderate drought stress19.989

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.788
DRR006520Root Summer glycyrrhizin high producing strain12.555
DRR006521Root Winter glycyrrhizin high producing strain6.309
DRR006522Root Winter glycyrrhizin high producing strain5.989
DRR006523Root Summer glycyrrhizin low producing strain11.757
DRR006524Root Summer glycyrrhizin low producing strain11.674
DRR006525Leaf Summer glycyrrhizin high producing strain10.829
DRR006526Leaf Summer glycyrrhizin high producing strain10.956

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.309
SRR2868004Drought Stress(Tissue:root)46.765
SRR2967015Control (Tissue:root)42.695

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.672
SRR9715740Leave15.416
SRR9715741Leave16.305
SRR9715739Root5.492
SRR9715742Root16.804
SRR9715743Root15.188

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.752
SRR8749028MeJA induced 9h22.204
SRR8749029MeJA induced 9h12.661
SRR8749030Uninduced9.472
SRR8749031Uninduced10.837
SRR8749032Uninduced5.422

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.694
SRR8400027Control-Root40.508

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved