Gene detail information of Glyur000252s00012659.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10940.12.00E-164Protein kinase superfamily protein
NRAET04893.20sucrose non-fermenting-like kinase 2 family protein [Medicago truncatula]
COGNP_109936.19.00E-24Ser/Thr/Tyr protein kinase [Mycoplasma pneumoniae M129]
Swissprottr|Q7XQP4|SAPK7_ORYSJ0Serine/threonine-protein kinase SAPK7
trEMBLtr|G7LGG5|G7LGG5_MEDTR0Sucrose non-fermenting-like kinase 2 family protein {ECO:0000313|EMBL:AET04893.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002525498759127-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000252s00012659.1PF00069.20Pkinase42723.60E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.475
SRR1783600control25.597
SRR1783602moderate drought stress18.600
SRR1811619moderate drought stress18.177

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.098
DRR006520Root Summer glycyrrhizin high producing strain26.902
DRR006521Root Winter glycyrrhizin high producing strain5.503
DRR006522Root Winter glycyrrhizin high producing strain5.443
DRR006523Root Summer glycyrrhizin low producing strain39.513
DRR006524Root Summer glycyrrhizin low producing strain40.141
DRR006525Leaf Summer glycyrrhizin high producing strain22.323
DRR006526Leaf Summer glycyrrhizin high producing strain22.452

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)60.132
SRR2868004Drought Stress(Tissue:root)51.199
SRR2967015Control (Tissue:root)44.507

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave79.837
SRR9715740Leave43.038
SRR9715741Leave71.469
SRR9715739Root22.346
SRR9715742Root38.198
SRR9715743Root31.924

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h73.511
SRR8749028MeJA induced 9h60.863
SRR8749029MeJA induced 9h61.194
SRR8749030Uninduced69.798
SRR8749031Uninduced14.190
SRR8749032Uninduced14.770

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.082
SRR8400027Control-Root34.235

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved