Gene detail information of Glyur000252s00012671.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51060.10NADPH/respiratory burst oxidase protein D
NRXP_003630437.10Respiratory burst oxidase-like protein [Medicago truncatula]
COGYP_007146260.13.00E-82putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprottr|Q2HXL0|RBOHC_SOLTU0Respiratory burst oxidase homolog protein C
trEMBLtr|G7LGI5|G7LGI5_MEDTR0Respiratory burst oxidase-like protein D {ECO:0000313|EMBL:AET04913.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00252149650156667+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13447RBOH EC:1.6.3.- 1.11.1.- MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0004601  peroxidase activity

GO:0005509  calcium ion binding

GO:0016491  oxidoreductase activity

GO:0050664  oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000252s00012671.1PF08414.5NADPH_Ox1191765.10E-15
Glyur000252s00012671.1PF13405.1EF-hand_62002250.00067
Glyur000252s00012671.1PF01794.14Ferric_reduct3585142.90E-16
Glyur000252s00012671.1PF08022.7FAD_binding_85576761.70E-30
Glyur000252s00012671.1PF08030.7NAD_binding_66838581.90E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control41.302
SRR1783600control41.602
SRR1783602moderate drought stress34.007
SRR1811619moderate drought stress33.777

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.634
DRR006520Root Summer glycyrrhizin high producing strain31.367
DRR006521Root Winter glycyrrhizin high producing strain6.227
DRR006522Root Winter glycyrrhizin high producing strain5.998
DRR006523Root Summer glycyrrhizin low producing strain30.885
DRR006524Root Summer glycyrrhizin low producing strain30.605
DRR006525Leaf Summer glycyrrhizin high producing strain28.128
DRR006526Leaf Summer glycyrrhizin high producing strain27.884

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.223
SRR2868004Drought Stress(Tissue:root)47.865
SRR2967015Control (Tissue:root)77.979

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.095
SRR9715740Leave21.477
SRR9715741Leave25.917
SRR9715739Root14.587
SRR9715742Root84.694
SRR9715743Root75.161

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.751
SRR8749028MeJA induced 9h4.101
SRR8749029MeJA induced 9h2.474
SRR8749030Uninduced9.648
SRR8749031Uninduced9.433
SRR8749032Uninduced12.024

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root70.231
SRR8400027Control-Root92.271

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved