Gene detail information of Glyur000253s00020230.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55950.10CRINKLY4 related 3
NRXP_004500493.10PREDICTED: putative serine/threonine-protein kinase-like protein CCR3-like [Cicer arietinum]
COGYP_001543477.11.00E-19serine/threonine kinase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q9LY50|ACCR3_ARATH0Putative serine/threonine-protein kinase-like protein CCR3 (Precursor)
trEMBLtr|K7MPI9|K7MPI9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03040.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002535222154680-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.4.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000253s00020230.1PF00069.20Pkinase5037923.70E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.863
SRR1783600control0.856
SRR1783602moderate drought stress0.918
SRR1811619moderate drought stress0.883

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.909
DRR006520Root Summer glycyrrhizin high producing strain3.921
DRR006521Root Winter glycyrrhizin high producing strain0.045
DRR006522Root Winter glycyrrhizin high producing strain0.044
DRR006523Root Summer glycyrrhizin low producing strain2.731
DRR006524Root Summer glycyrrhizin low producing strain2.756
DRR006525Leaf Summer glycyrrhizin high producing strain3.205
DRR006526Leaf Summer glycyrrhizin high producing strain3.315

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.859
SRR2868004Drought Stress(Tissue:root)24.254
SRR2967015Control (Tissue:root)25.725

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.388
SRR9715740Leave17.696
SRR9715741Leave30.155
SRR9715739Root37.873
SRR9715742Root81.653
SRR9715743Root74.396

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.085
SRR8749028MeJA induced 9h28.172
SRR8749029MeJA induced 9h15.310
SRR8749030Uninduced44.321
SRR8749031Uninduced25.356
SRR8749032Uninduced16.283

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.229
SRR8400027Control-Root12.798

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved