Gene detail information of Glyur000253s00020248.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05690.12.00E-180Cytochrome P450 superfamily protein
NRXP_003600878.10Cytochrome P450 [Medicago truncatula]
COGYP_001519436.13.00E-55cytochrome P450 family protein [Acaryochloris marina MBIC11017]
Swissprottr|Q42569|C90A1_ARATH0Cytochrome P450 90A1
trEMBLtr|G7JB77|G7JB77_MEDTR0Cytochrome P450 family monooxygenase {ECO:0000313|EMBL:AES71129.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00253214594222767-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP90A1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09588CYP90A1, CPD EC:1.14.-.- Brassinosteroid biosynthesis map00905


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000253s00020248.1PF00067.17p450361372.70E-05
Glyur000253s00020248.1PF00067.17p4502034483.70E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.691
SRR1783600control19.955
SRR1783602moderate drought stress22.897
SRR1811619moderate drought stress22.923

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.382
DRR006520Root Summer glycyrrhizin high producing strain15.254
DRR006521Root Winter glycyrrhizin high producing strain13.067
DRR006522Root Winter glycyrrhizin high producing strain12.644
DRR006523Root Summer glycyrrhizin low producing strain19.425
DRR006524Root Summer glycyrrhizin low producing strain19.258
DRR006525Leaf Summer glycyrrhizin high producing strain45.438
DRR006526Leaf Summer glycyrrhizin high producing strain45.115

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.826
SRR2868004Drought Stress(Tissue:root)5.615
SRR2967015Control (Tissue:root)6.486

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave41.173
SRR9715740Leave51.625
SRR9715741Leave57.626
SRR9715739Root10.080
SRR9715742Root14.888
SRR9715743Root12.832

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.865
SRR8749028MeJA induced 9h4.518
SRR8749029MeJA induced 9h2.945
SRR8749030Uninduced34.919
SRR8749031Uninduced9.715
SRR8749032Uninduced22.144

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.931
SRR8400027Control-Root7.169