Gene detail information of Glyur000254s00017616.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G12200.17.00E-25pyrimidine 2
NRXP_003617228.16.20E-34Dihydropyrimidinase [Medicago truncatula]
trEMBLtr|G7K315|G7K315_MEDTR2.00E-34Dihydropyrimidinase {ECO:0000313|EMBL:AET00187.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00254160245161262-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01464DPYS, dht, hydA EC:3.5.2.2 Pyrimidine metabolism map00240
beta-Alanine metabolismmap00410
Pantothenate and CoA biosynthesismap00770
Drug metabolism - other enzymesmap00983


Gene Ontology

molecular_function

GO:0016810  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.589
SRR1783600control18.453
SRR1783602moderate drought stress14.577
SRR1811619moderate drought stress14.329

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.784
DRR006520Root Summer glycyrrhizin high producing strain17.572
DRR006521Root Winter glycyrrhizin high producing strain24.814
DRR006522Root Winter glycyrrhizin high producing strain22.402
DRR006523Root Summer glycyrrhizin low producing strain14.418
DRR006524Root Summer glycyrrhizin low producing strain16.227
DRR006525Leaf Summer glycyrrhizin high producing strain13.813
DRR006526Leaf Summer glycyrrhizin high producing strain15.814

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.829
SRR2868004Drought Stress(Tissue:root)40.864
SRR2967015Control (Tissue:root)31.739

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.199
SRR9715740Leave37.612
SRR9715741Leave41.908
SRR9715739Root9.701
SRR9715742Root25.352
SRR9715743Root23.390

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.241
SRR8749028MeJA induced 9h15.435
SRR8749029MeJA induced 9h15.056
SRR8749030Uninduced22.247
SRR8749031Uninduced12.961
SRR8749032Uninduced10.783

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.191
SRR8400027Control-Root25.127

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved