Gene detail information of Glyur000254s00017617.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G12200.10pyrimidine 2
NRXP_004491233.10PREDICTED: dihydropyrimidinase-like isoform X1 [Cicer arietinum]
COGYP_006373967.16.00E-165dihydropyrimidinase [Tistrella mobilis KA081020-065]
Swissprottr|B9FDB8|ALN_ORYSJ2.00E-17Probable allantoinase
trEMBLtr|G7K315|G7K315_MEDTR0Dihydropyrimidinase {ECO:0000313|EMBL:AET00187.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00254167440175156-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01464DPYS, dht, hydA EC:3.5.2.2 Pyrimidine metabolism map00240
beta-Alanine metabolismmap00410
Pantothenate and CoA biosynthesismap00770
Drug metabolism - other enzymesmap00983


Gene Ontology

cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0016787  hydrolase activity

GO:0016810  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000254s00017617.1PF01979.15Amidohydro_11114648.40E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.659
SRR1783600control57.953
SRR1783602moderate drought stress60.417
SRR1811619moderate drought stress59.511

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain39.543
DRR006520Root Summer glycyrrhizin high producing strain38.326
DRR006521Root Winter glycyrrhizin high producing strain40.164
DRR006522Root Winter glycyrrhizin high producing strain39.161
DRR006523Root Summer glycyrrhizin low producing strain36.467
DRR006524Root Summer glycyrrhizin low producing strain36.664
DRR006525Leaf Summer glycyrrhizin high producing strain29.160
DRR006526Leaf Summer glycyrrhizin high producing strain28.429

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)56.998
SRR2868004Drought Stress(Tissue:root)69.374
SRR2967015Control (Tissue:root)51.520

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.028
SRR9715740Leave51.160
SRR9715741Leave57.913
SRR9715739Root27.913
SRR9715742Root47.690
SRR9715743Root44.702

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.963
SRR8749028MeJA induced 9h80.064
SRR8749029MeJA induced 9h44.168
SRR8749030Uninduced66.211
SRR8749031Uninduced48.298
SRR8749032Uninduced41.647

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.178
SRR8400027Control-Root54.602

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved