Gene detail information of Glyur000255s00016813.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15120.12.00E-63Protein of unknown function (DUF1637)
NRXP_004493204.11.43E-165PREDICTED: 2-aminoethanethiol dioxygenase-like [Cicer arietinum]
trEMBLtr|Q2HVC5|Q2HVC5_MEDTR4.00E-163Cupin, RmlC-type {ECO:0000313|EMBL:ABD28522.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002555364757546+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10712ADO EC:1.13.11.19 Taurine and hypotaurine metabolism map00430


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0047800  cysteamine dioxygenase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000255s00016813.1PF07847.7DUF1637842894.10E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.121
SRR1783600control0.122
SRR1783602moderate drought stress0.076
SRR1811619moderate drought stress0.076

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.734
DRR006520Root Summer glycyrrhizin high producing strain3.745
DRR006521Root Winter glycyrrhizin high producing strain944.765
DRR006522Root Winter glycyrrhizin high producing strain918.768
DRR006523Root Summer glycyrrhizin low producing strain18.805
DRR006524Root Summer glycyrrhizin low producing strain19.647
DRR006525Leaf Summer glycyrrhizin high producing strain1.159
DRR006526Leaf Summer glycyrrhizin high producing strain1.236

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.423
SRR2868004Drought Stress(Tissue:root)0.067
SRR2967015Control (Tissue:root)0.275

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.088
SRR9715740Leave0.442
SRR9715741Leave0.305
SRR9715739Root0.165
SRR9715742Root0.720
SRR9715743Root0.345

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h518.125
SRR8749028MeJA induced 9h1163.231
SRR8749029MeJA induced 9h1394.131
SRR8749030Uninduced271.366
SRR8749031Uninduced1040.738
SRR8749032Uninduced1423.262

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.698
SRR8400027Control-Root11.078

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved