Gene detail information of Glyur000256s00016239.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05080.21.00E-92ubiquitin-conjugating enzyme 22
NRXP_006604082.15.20E-155PREDICTED: ubiquitin-conjugating enzyme E2 22-like isoform X1 [Glycine max]
COGYP_008797956.11.00E-10ubiquitin-conjugating enzyme E2-like protein [Candidatus Caldiarchaeum subterraneum]
Swissprottr|Q9FF66|UBC22_ARATH3.00E-127Ubiquitin-conjugating enzyme E2 22
trEMBLtr|I1N7B5|I1N7B5_SOYBN2.00E-155Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G21400.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002562512428620-


Gene family

Gene familysubfamily
Ubiquitin FamilyUBC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10583UBE2S, E2EPF EC:2.3.2.23 Ubiquitin mediated proteolysis map04120


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000256s00016239.1PF00179.21UQ_con151503.00E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.970
SRR1783600control18.061
SRR1783602moderate drought stress17.449
SRR1811619moderate drought stress17.257

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.329
DRR006520Root Summer glycyrrhizin high producing strain30.566
DRR006521Root Winter glycyrrhizin high producing strain16.885
DRR006522Root Winter glycyrrhizin high producing strain15.889
DRR006523Root Summer glycyrrhizin low producing strain23.986
DRR006524Root Summer glycyrrhizin low producing strain23.111
DRR006525Leaf Summer glycyrrhizin high producing strain6.356
DRR006526Leaf Summer glycyrrhizin high producing strain5.682

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.770
SRR2868004Drought Stress(Tissue:root)17.970
SRR2967015Control (Tissue:root)21.534

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.778
SRR9715740Leave13.093
SRR9715741Leave8.061
SRR9715739Root5.892
SRR9715742Root12.377
SRR9715743Root8.938

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.686
SRR8749028MeJA induced 9h23.867
SRR8749029MeJA induced 9h17.831
SRR8749030Uninduced18.418
SRR8749031Uninduced12.613
SRR8749032Uninduced15.068

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.879
SRR8400027Control-Root26.409

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved