Gene detail information of Glyur000257s00022028.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03690.1 | 3.00E-133 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_007151475.1 | 0 | hypothetical protein PHAVU_004G049700g [Phaseolus vulgaris] |
| trEMBL | tr|V7BZZ1|V7BZZ1_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW23469.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00257 | 135482 | 139741 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000257s00022028.1 | PF02485.16 | Branch | 71 | 330 | 3.80E-64 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.754 |
| SRR1783600 | control | 2.598 |
| SRR1783602 | moderate drought stress | 4.345 |
| SRR1811619 | moderate drought stress | 4.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.731 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.816 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.735 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.905 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.175 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.455 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.457 |
| SRR2967015 | Control (Tissue:root) | 9.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.679 |
| SRR9715740 | Leave | 0.990 |
| SRR9715741 | Leave | 0.046 |
| SRR9715739 | Root | 0.663 |
| SRR9715742 | Root | 3.564 |
| SRR9715743 | Root | 2.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.037 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.016 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.047 |
| SRR8400027 | Control-Root | 23.966 |