Gene detail information of Glyur000258s00015246.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01040.10galacturonosyltransferase 13
NRXP_004491881.10PREDICTED: probable galacturonosyltransferase 14-like [Cicer arietinum]
COGYP_007091831.13.00E-09glycosyl transferase family protein [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q0WV13|GAUTD_ARATH0Probable galacturonosyltransferase 13
trEMBLtr|I1N6A4|I1N6A4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G03460.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002581464420854+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000258s00015246.1PF01501.15Glyco_transf_81765082.70E-72


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.413
SRR1783600control5.558
SRR1783602moderate drought stress3.583
SRR1811619moderate drought stress3.627

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.926
DRR006520Root Summer glycyrrhizin high producing strain3.973
DRR006521Root Winter glycyrrhizin high producing strain0.998
DRR006522Root Winter glycyrrhizin high producing strain0.990
DRR006523Root Summer glycyrrhizin low producing strain4.368
DRR006524Root Summer glycyrrhizin low producing strain4.207
DRR006525Leaf Summer glycyrrhizin high producing strain3.673
DRR006526Leaf Summer glycyrrhizin high producing strain3.718

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.937
SRR2868004Drought Stress(Tissue:root)5.577
SRR2967015Control (Tissue:root)6.819

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.035
SRR9715740Leave7.857
SRR9715741Leave8.411
SRR9715739Root0.694
SRR9715742Root2.509
SRR9715743Root1.531

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.218
SRR8749028MeJA induced 9h3.334
SRR8749029MeJA induced 9h1.730
SRR8749030Uninduced3.713
SRR8749031Uninduced2.222
SRR8749032Uninduced0.877

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.503
SRR8400027Control-Root7.216