Gene detail information of Glyur000258s00015246.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT3G01040.1 | 0 | galacturonosyltransferase 13 |
NR | XP_004491881.1 | 0 | PREDICTED: probable galacturonosyltransferase 14-like [Cicer arietinum] |
COG | YP_007091831.1 | 3.00E-09 | glycosyl transferase family protein [Chroococcidiopsis thermalis PCC 7203] |
Swissprot | tr|Q0WV13|GAUTD_ARATH | 0 | Probable galacturonosyltransferase 13 |
trEMBL | tr|I1N6A4|I1N6A4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G03460.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00258 | 14644 | 20854 | + |
Gene family
Gene family | subfamily |
---|---|
Carbohydrate-Active enzymes Family | GT8 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000258s00015246.1 | PF01501.15 | Glyco_transf_8 | 176 | 508 | 2.70E-72 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 5.413 |
SRR1783600 | control | 5.558 |
SRR1783602 | moderate drought stress | 3.583 |
SRR1811619 | moderate drought stress | 3.627 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 3.926 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 3.973 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.998 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.990 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 4.368 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 4.207 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.673 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.718 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 7.937 |
SRR2868004 | Drought Stress(Tissue:root) | 5.577 |
SRR2967015 | Control (Tissue:root) | 6.819 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 6.035 |
SRR9715740 | Leave | 7.857 |
SRR9715741 | Leave | 8.411 |
SRR9715739 | Root | 0.694 |
SRR9715742 | Root | 2.509 |
SRR9715743 | Root | 1.531 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 2.218 |
SRR8749028 | MeJA induced 9h | 3.334 |
SRR8749029 | MeJA induced 9h | 1.730 |
SRR8749030 | Uninduced | 3.713 |
SRR8749031 | Uninduced | 2.222 |
SRR8749032 | Uninduced | 0.877 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 9.503 |
SRR8400027 | Control-Root | 7.216 |