Gene detail information of Glyur000258s00015271.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01090.20SNF1 kinase homolog 10
NRXP_004489425.10PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Cicer arietinum]
COGYP_002760435.12.00E-33putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|Q38997|KIN10_ARATH0SNF1-related protein kinase catalytic subunit alpha KIN10
trEMBLtr|V7C1V2|V7C1V2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW23260.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00258161418168165+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07198PRKAA, AMPK EC:2.7.11.11 FoxO signaling pathway map04068
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Tight junctionmap04530
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Adipocytokine signaling pathwaymap04920
Oxytocin signaling pathwaymap04921
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - multiple speciesmap04213
Circadian rhythmmap04710
Fluid shear stress and atherosclerosismap05418
Hypertrophic cardiomyopathy (HCM)map05410
Non-alcoholic fatty liver disease (NAFLD)map04932
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000258s00015271.1PF00069.20Pkinase202721.30E-80
Glyur000258s00015271.1PF00627.26UBA2943304.20E-05
Glyur000258s00015271.1PF02149.14KA14695132.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control49.293
SRR1783600control49.549
SRR1783602moderate drought stress54.422
SRR1811619moderate drought stress53.902

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain64.493
DRR006520Root Summer glycyrrhizin high producing strain63.843
DRR006521Root Winter glycyrrhizin high producing strain67.400
DRR006522Root Winter glycyrrhizin high producing strain65.667
DRR006523Root Summer glycyrrhizin low producing strain48.452
DRR006524Root Summer glycyrrhizin low producing strain48.271
DRR006525Leaf Summer glycyrrhizin high producing strain31.320
DRR006526Leaf Summer glycyrrhizin high producing strain31.149

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)56.913
SRR2868004Drought Stress(Tissue:root)63.766
SRR2967015Control (Tissue:root)61.789

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.315
SRR9715740Leave40.516
SRR9715741Leave31.895
SRR9715739Root28.453
SRR9715742Root27.077
SRR9715743Root26.716

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.975
SRR8749028MeJA induced 9h30.694
SRR8749029MeJA induced 9h11.594
SRR8749030Uninduced8.002
SRR8749031Uninduced6.054
SRR8749032Uninduced7.058

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root66.179
SRR8400027Control-Root53.692

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved