Gene detail information of Glyur000259s00016729.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05010.11.00E-47ethylene-forming enzyme
NRKHN00185.11.81E-1181-aminocyclopropane-1-carboxylate oxidase [Glycine soja]
COGYP_167879.15.00E-15oxidoreductase, 2OG-Fe(II) oxygenase family [Ruegeria pomeroyi DSS-3]
Swissprottr|Q9MB94|ACCO_PRUMU1.00E-1091-aminocyclopropane-1-carboxylate oxidase
trEMBLtr|I1KQG3|I1KQG3_SOYBN3.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G05500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00259101199+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05933E1.14.17.4 EC:1.14.17.4 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000259s00016729.1PF14226.1DIOX_N1641.10E-06
Glyur000259s00016729.1PF03171.152OG-FeII_Oxy1081712.60E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.266
SRR1783600control0.312
SRR1783602moderate drought stress0.483
SRR1811619moderate drought stress0.387

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.994
DRR006520Root Summer glycyrrhizin high producing strain36.868
DRR006521Root Winter glycyrrhizin high producing strain0.818
DRR006522Root Winter glycyrrhizin high producing strain0.873
DRR006523Root Summer glycyrrhizin low producing strain80.301
DRR006524Root Summer glycyrrhizin low producing strain76.417
DRR006525Leaf Summer glycyrrhizin high producing strain0.311
DRR006526Leaf Summer glycyrrhizin high producing strain0.274

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.510
SRR2868004Drought Stress(Tissue:root)17.310
SRR2967015Control (Tissue:root)9.459

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.768
SRR9715740Leave8.098
SRR9715741Leave53.061
SRR9715739Root13.494
SRR9715742Root97.606
SRR9715743Root79.407

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.677
SRR8749028MeJA induced 9h0.987
SRR8749029MeJA induced 9h0.878
SRR8749030Uninduced107.052
SRR8749031Uninduced73.331
SRR8749032Uninduced52.426

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.593
SRR8400027Control-Root8.015

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved