Gene detail information of Glyur000259s00016746.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G35710.10Protein kinase family protein with leucine-rich repeat domain
NRXP_003616915.10DNA-directed RNA polymerase subunit beta [Medicago truncatula]
COGYP_004775215.12.00E-60RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q8VZG8|Y4885_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBLtr|G7K7I9|G7K7I9_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES99873.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00259112569116117+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000259s00016746.1PF08263.7LRRNT_2611014.10E-09
Glyur000259s00016746.1PF00560.28LRR_12042260.78
Glyur000259s00016746.1PF13855.1LRR_82282861.40E-06
Glyur000259s00016746.1PF13855.1LRR_83243831.70E-07
Glyur000259s00016746.1PF13516.1LRR_64184402
Glyur000259s00016746.1PF00560.28LRR_15405620.086
Glyur000259s00016746.1PF13855.1LRR_86366952.70E-07
Glyur000259s00016746.1PF00069.20Pkinase81310772.20E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.254
SRR1783600control1.253
SRR1783602moderate drought stress0.513
SRR1811619moderate drought stress0.464

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.033
DRR006520Root Summer glycyrrhizin high producing strain0.032
DRR006521Root Winter glycyrrhizin high producing strain0.140
DRR006522Root Winter glycyrrhizin high producing strain0.198
DRR006523Root Summer glycyrrhizin low producing strain0.033
DRR006524Root Summer glycyrrhizin low producing strain0.033
DRR006525Leaf Summer glycyrrhizin high producing strain0.394
DRR006526Leaf Summer glycyrrhizin high producing strain0.393

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.064
SRR2868004Drought Stress(Tissue:root)0.114
SRR2967015Control (Tissue:root)0.098

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.069
SRR9715740Leave0.029
SRR9715741Leave0.042
SRR9715739Root0.120
SRR9715742Root0.496
SRR9715743Root0.470

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.018
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.017

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.438
SRR8400027Control-Root2.732

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved