Gene detail information of Glyur000260s00013528.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G62000.30auxin response factor 2
NRXP_003525433.10PREDICTED: auxin response factor 2-like isoform X1 [Glycine max]
Swissprottr|Q94JM3|ARFB_ARATH0Auxin response factor 2
trEMBLtr|I1K6T1|I1K6T1_SOYBN0Auxin response factor {ECO:0000256|RuleBase:RU004561}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002607345379365+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0009725  response to hormone


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0046983  protein dimerization activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000260s00013528.1PF06507.8Auxin_resp1672495.30E-35
Glyur000260s00013528.1PF02309.11AUX_IAA5957052.30E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control69.334
SRR1783600control69.118
SRR1783602moderate drought stress93.984
SRR1811619moderate drought stress93.136

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain79.568
DRR006520Root Summer glycyrrhizin high producing strain78.496
DRR006521Root Winter glycyrrhizin high producing strain65.977
DRR006522Root Winter glycyrrhizin high producing strain64.151
DRR006523Root Summer glycyrrhizin low producing strain90.550
DRR006524Root Summer glycyrrhizin low producing strain90.373
DRR006525Leaf Summer glycyrrhizin high producing strain28.227
DRR006526Leaf Summer glycyrrhizin high producing strain27.989

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)66.676
SRR2868004Drought Stress(Tissue:root)93.327
SRR2967015Control (Tissue:root)101.081

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave55.316
SRR9715740Leave48.912
SRR9715741Leave74.601
SRR9715739Root30.885
SRR9715742Root106.207
SRR9715743Root92.730

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h68.028
SRR8749028MeJA induced 9h61.715
SRR8749029MeJA induced 9h92.761
SRR8749030Uninduced114.087
SRR8749031Uninduced90.459
SRR8749032Uninduced60.109

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.653
SRR8400027Control-Root90.349

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved