Gene detail information of Glyur000260s00013539.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48820.20Glycosyltransferase family 29 (sialyltransferase) family protein
NRNP_001241929.10uncharacterized LOC100783885 [Glycine max]
trEMBLtr|Q4JEZ7|Q4JEZ7_SOYBN0Sialyltransferase-like protein {ECO:0000313|EMBL:CAJ15143.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00260156097160332+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT29


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006486  protein glycosylation


molecular_function

GO:0008373  sialyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000260s00013539.1PF00777.13Glyco_transf_291452292.30E-26
Glyur000260s00013539.1PF00777.13Glyco_transf_292343445.00E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.325
SRR1783600control8.380
SRR1783602moderate drought stress6.552
SRR1811619moderate drought stress6.631

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.418
DRR006520Root Summer glycyrrhizin high producing strain9.282
DRR006521Root Winter glycyrrhizin high producing strain10.380
DRR006522Root Winter glycyrrhizin high producing strain10.267
DRR006523Root Summer glycyrrhizin low producing strain6.784
DRR006524Root Summer glycyrrhizin low producing strain6.374
DRR006525Leaf Summer glycyrrhizin high producing strain7.709
DRR006526Leaf Summer glycyrrhizin high producing strain7.551

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.572
SRR2868004Drought Stress(Tissue:root)16.372
SRR2967015Control (Tissue:root)16.864

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.069
SRR9715740Leave9.296
SRR9715741Leave8.885
SRR9715739Root1.308
SRR9715742Root4.222
SRR9715743Root4.991

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.862
SRR8749028MeJA induced 9h6.808
SRR8749029MeJA induced 9h4.031
SRR8749030Uninduced2.932
SRR8749031Uninduced2.230
SRR8749032Uninduced1.491

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.240
SRR8400027Control-Root18.458

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved