Gene detail information of Glyur000260s00013548.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64210.16.00E-134Leucine-rich repeat protein kinase family protein
NRKEH21182.10LRR receptor-like kinase [Medicago truncatula]
COGYP_004775215.12.00E-16RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SUQ3|Y4374_ARATH0Probable inactive receptor kinase At4g23740 (Precursor)
trEMBLtr|A0A072TUR7|A0A072TUR7_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:KEH21182.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00260203816207178-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000260s00013548.1PF08263.7LRRNT_231672.50E-08
Glyur000260s00013548.1PF00560.28LRR_1981190.47
Glyur000260s00013548.1PF00560.28LRR_11902110.049
Glyur000260s00013548.1PF00069.20Pkinase3475992.30E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.881
SRR1783600control0.844
SRR1783602moderate drought stress0.447
SRR1811619moderate drought stress0.472

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.390
DRR006520Root Summer glycyrrhizin high producing strain1.216
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.544
DRR006524Root Summer glycyrrhizin low producing strain0.451
DRR006525Leaf Summer glycyrrhizin high producing strain1.406
DRR006526Leaf Summer glycyrrhizin high producing strain1.363

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.496
SRR2868004Drought Stress(Tissue:root)1.630
SRR2967015Control (Tissue:root)2.756

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.263
SRR9715740Leave2.609
SRR9715741Leave0.648
SRR9715739Root1.176
SRR9715742Root1.866
SRR9715743Root0.958

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.478
SRR8749028MeJA induced 9h0.472
SRR8749029MeJA induced 9h0.301
SRR8749030Uninduced0.066
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.005
SRR8400027Control-Root2.298

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved