Gene detail information of Glyur000261s00014360.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30040.16.00E-108gibberellin 2-oxidase
NRXP_003608505.10Gibberellin 2-oxidase [Medicago truncatula]
COGYP_004572412.11.00E-22oxidoreductase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9XG83|G2OX_PHACN1.00E-158Gibberellin 2-beta-dioxygenase
trEMBLtr|G7JE01|G7JE01_MEDTR0Plant gibberellin 2-oxidase {ECO:0000313|EMBL:AES90702.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00261117443119850-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04125E1.14.11.13 EC:1.14.11.13 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000261s00014360.1PF14226.1DIOX_N1082015.70E-11
Glyur000261s00014360.1PF03171.152OG-FeII_Oxy2613596.90E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.142
SRR1783600control0.119
SRR1783602moderate drought stress0.099
SRR1811619moderate drought stress0.095

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.349
DRR006520Root Summer glycyrrhizin high producing strain0.348
DRR006521Root Winter glycyrrhizin high producing strain15.545
DRR006522Root Winter glycyrrhizin high producing strain15.227
DRR006523Root Summer glycyrrhizin low producing strain0.498
DRR006524Root Summer glycyrrhizin low producing strain0.429
DRR006525Leaf Summer glycyrrhizin high producing strain1.491
DRR006526Leaf Summer glycyrrhizin high producing strain1.309

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.504
SRR2868004Drought Stress(Tissue:root)2.246
SRR2967015Control (Tissue:root)3.273

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.000
SRR9715740Leave0.472
SRR9715741Leave0.126
SRR9715739Root0.444
SRR9715742Root0.800
SRR9715743Root0.883

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h54.490
SRR8749028MeJA induced 9h14.570
SRR8749029MeJA induced 9h29.724
SRR8749030Uninduced1.559
SRR8749031Uninduced0.293
SRR8749032Uninduced0.883

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.544
SRR8400027Control-Root2.127

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved