Gene detail information of Glyur000262s00020204.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT5G56790.1 | 6.00E-84 | Protein kinase superfamily protein |
NR | XP_004516526.1 | 0 | PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cicer arietinum] |
COG | NP_623114.1 | 2.00E-27 | Serine/threonine protein kinase [Thermoanaerobacter tengcongensis MB4] |
Swissprot | tr|Q9ZUE0|PEK12_ARATH | 2.00E-75 | Proline-rich receptor-like protein kinase PERK12 |
trEMBL | tr|A0A072UUB3|A0A072UUB3_MEDTR | 0 | Dual-specificity kinase domain protein {ECO:0000313|EMBL:KEH32931.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00262 | 13243 | 27639 | - |
Gene family
Gene family | subfamily |
---|---|
Protein Kinases Family | PPC:1.6.2 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000262s00020204.1 | PF07714.12 | Pkinase_Tyr | 274 | 531 | 3.10E-49 |
Glyur000262s00020204.1 | PF07714.12 | Pkinase_Tyr | 691 | 923 | 1.30E-47 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.026 |
SRR1783600 | control | 0.026 |
SRR1783602 | moderate drought stress | 0.150 |
SRR1811619 | moderate drought stress | 0.137 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.067 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.066 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 0.591 |
SRR2868004 | Drought Stress(Tissue:root) | 1.000 |
SRR2967015 | Control (Tissue:root) | 0.311 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 0.073 |
SRR9715740 | Leave | 0.000 |
SRR9715741 | Leave | 0.070 |
SRR9715739 | Root | 0.000 |
SRR9715742 | Root | 0.000 |
SRR9715743 | Root | 0.000 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 0.066 |
SRR8749028 | MeJA induced 9h | 0.134 |
SRR8749029 | MeJA induced 9h | 0.061 |
SRR8749030 | Uninduced | 0.159 |
SRR8749031 | Uninduced | 0.636 |
SRR8749032 | Uninduced | 0.153 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 1.387 |
SRR8400027 | Control-Root | 2.295 |