Gene detail information of Glyur000262s00020224.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52525.1 | 2.00E-29 | ovate family protein 6 |
| NR | XP_007145810.1 | 6.91E-66 | hypothetical protein PHAVU_007G269800g [Phaseolus vulgaris] |
| Swissprot | tr|Q3EAL1|OFP6_ARATH | 5.00E-37 | Transcription repressor OFP6 |
| trEMBL | tr|V7BIM6|V7BIM6_PHAVU | 3.00E-66 | Uncharacterized protein {ECO:0000313|EMBL:ESW17804.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00262 | 218831 | 220101 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000262s00020224.1 | PF04844.8 | Ovate | 105 | 159 | 6.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.070 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.217 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.217 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.803 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.282 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.384 |
| SRR2967015 | Control (Tissue:root) | 0.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.500 |
| SRR9715740 | Leave | 0.099 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.100 |
| SRR9715743 | Root | 0.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.020 |
| SRR8400027 | Control-Root | 0.176 |