Gene detail information of Glyur000263s00013559.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71070.1 | 3.00E-158 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_003592541.1 | 0 | Xylosyltransferase [Medicago truncatula] |
| trEMBL | tr|G7IAS1|G7IAS1_MEDTR | 0 | Core-2/I-branching enzyme {ECO:0000313|EMBL:AES62792.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00263 | 30022 | 33869 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000263s00013559.1 | PF02485.16 | Branch | 50 | 317 | 6.60E-53 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.454 |
| SRR1783600 | control | 22.488 |
| SRR1783602 | moderate drought stress | 19.327 |
| SRR1811619 | moderate drought stress | 19.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.729 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.004 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.830 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.210 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.840 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.869 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 41.415 |
| SRR2868004 | Drought Stress(Tissue:root) | 47.559 |
| SRR2967015 | Control (Tissue:root) | 41.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 19.031 |
| SRR9715740 | Leave | 14.453 |
| SRR9715741 | Leave | 19.133 |
| SRR9715739 | Root | 19.778 |
| SRR9715742 | Root | 24.097 |
| SRR9715743 | Root | 23.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.890 |
| SRR8749028 | MeJA induced 9h | 23.398 |
| SRR8749029 | MeJA induced 9h | 12.439 |
| SRR8749030 | Uninduced | 18.628 |
| SRR8749031 | Uninduced | 13.409 |
| SRR8749032 | Uninduced | 10.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 33.498 |
| SRR8400027 | Control-Root | 33.299 |