Gene detail information of Glyur000263s00013575.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G19420.10PTEN 2
NRXP_004496964.10PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN-like [Cicer arietinum]
trEMBLtr|A0A072VR13|A0A072VR13_MEDTR0Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase {ECO:0000313|EMBL:KEH44126.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00263108511114347+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01110PTEN EC:3.1.3.16 3.1.3.48 3.1.3.67 Inositol phosphate metabolism map00562
FoxO signaling pathwaymap04068
Phosphatidylinositol signaling systemmap04070
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
p53 signaling pathwaymap04115
Focal adhesionmap04510
Longevity regulating pathway - wormmap04212
Pathways in cancermap05200
Central carbon metabolism in cancermap05230
MicroRNAs in cancermap05206
Gliomamap05214
Melanomamap05218
Prostate cancermap05215
Endometrial cancermap05213
Breast cancermap05224
Small cell lung cancermap05222
Insulin resistancemap04931
Hepatitis Bmap05161
EGFR tyrosine kinase inhibitor resistancemap01521


Gene Ontology

biological_process

GO:0016311  dephosphorylation


molecular_function

GO:0004725  protein tyrosine phosphatase activity

GO:0016791  phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000263s00013575.1PF10409.4PTEN_C23334578.90E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.944
SRR1783600control47.730
SRR1783602moderate drought stress41.860
SRR1811619moderate drought stress41.425

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain51.318
DRR006520Root Summer glycyrrhizin high producing strain49.757
DRR006521Root Winter glycyrrhizin high producing strain74.448
DRR006522Root Winter glycyrrhizin high producing strain71.999
DRR006523Root Summer glycyrrhizin low producing strain57.850
DRR006524Root Summer glycyrrhizin low producing strain57.457
DRR006525Leaf Summer glycyrrhizin high producing strain35.022
DRR006526Leaf Summer glycyrrhizin high producing strain34.596

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)101.067
SRR2868004Drought Stress(Tissue:root)109.898
SRR2967015Control (Tissue:root)112.258

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave42.479
SRR9715740Leave42.615
SRR9715741Leave56.535
SRR9715739Root7.807
SRR9715742Root37.207
SRR9715743Root30.074

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h68.515
SRR8749028MeJA induced 9h90.812
SRR8749029MeJA induced 9h65.922
SRR8749030Uninduced65.014
SRR8749031Uninduced81.998
SRR8749032Uninduced50.243

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root82.926
SRR8400027Control-Root83.244

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved