Gene detail information of Glyur000263s00013597.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G19450.15.00E-138GroES-like zinc-binding alcohol dehydrogenase family protein
NRAEV93476.10cinnamyl alcohol dehydrogenase [Caragana korshinskii]
COGYP_003897964.13.00E-111alcohol dehydrogenase [Halomonas elongata DSM 2581]
Swissprottr|P31656|CADH_MEDSA0Probable cinnamyl alcohol dehydrogenase
trEMBLtr|V9I5Y7|V9I5Y7_9FABA0Cinnamyl alcohol dehydrogenase {ECO:0000313|EMBL:AEV93476.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00263213322215609-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00083E1.1.1.195 EC:1.1.1.195 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000263s00013597.1PF08240.7ADH_N341492.80E-28
Glyur000263s00013597.1PF00107.21ADH_zinc_N1913128.50E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control168.773
SRR1783600control167.861
SRR1783602moderate drought stress330.781
SRR1811619moderate drought stress332.459

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain140.785
DRR006520Root Summer glycyrrhizin high producing strain140.085
DRR006521Root Winter glycyrrhizin high producing strain115.287
DRR006522Root Winter glycyrrhizin high producing strain112.613
DRR006523Root Summer glycyrrhizin low producing strain230.002
DRR006524Root Summer glycyrrhizin low producing strain232.858
DRR006525Leaf Summer glycyrrhizin high producing strain90.821
DRR006526Leaf Summer glycyrrhizin high producing strain90.798

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)428.577
SRR2868004Drought Stress(Tissue:root)540.905
SRR2967015Control (Tissue:root)524.468

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave273.442
SRR9715740Leave396.701
SRR9715741Leave552.374
SRR9715739Root143.508
SRR9715742Root264.911
SRR9715743Root240.981

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h155.352
SRR8749028MeJA induced 9h301.017
SRR8749029MeJA induced 9h134.914
SRR8749030Uninduced247.424
SRR8749031Uninduced176.456
SRR8749032Uninduced120.937

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root287.553
SRR8400027Control-Root208.527

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved