Gene detail information of Glyur000264s00019967.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45910.10U-box domain-containing protein kinase family protein
NRXP_003534561.10PREDICTED: U-box domain-containing protein 33-like isoform X1 [Glycine max]
COGYP_001958461.15.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q8GUH1|PUB33_ARATH0Serine/threonine-protein kinase
trEMBLtr|K7LG44|K7LG44_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G39515.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0026493634100031-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.14.2
Ubiquitin FamilyU_box


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0016567  protein ubiquitination


molecular_function

GO:0004672  protein kinase activity

GO:0004842  ubiquitin-protein transferase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000264s00019967.1PF00069.20Pkinase4667192.20E-43
Glyur000264s00019967.1PF04564.10U-box7528214.40E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.623
SRR1783600control27.871
SRR1783602moderate drought stress27.750
SRR1811619moderate drought stress27.497

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.392
DRR006520Root Summer glycyrrhizin high producing strain40.525
DRR006521Root Winter glycyrrhizin high producing strain73.464
DRR006522Root Winter glycyrrhizin high producing strain71.831
DRR006523Root Summer glycyrrhizin low producing strain53.419
DRR006524Root Summer glycyrrhizin low producing strain52.641
DRR006525Leaf Summer glycyrrhizin high producing strain46.805
DRR006526Leaf Summer glycyrrhizin high producing strain46.469

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)53.337
SRR2868004Drought Stress(Tissue:root)65.354
SRR2967015Control (Tissue:root)70.116

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave39.132
SRR9715740Leave48.980
SRR9715741Leave49.448
SRR9715739Root8.405
SRR9715742Root42.703
SRR9715743Root36.939

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.790
SRR8749028MeJA induced 9h34.874
SRR8749029MeJA induced 9h19.590
SRR8749030Uninduced19.632
SRR8749031Uninduced15.659
SRR8749032Uninduced11.893

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root55.014
SRR8400027Control-Root52.350

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved