Gene detail information of Glyur000266s00012631.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24310.1 | 3.00E-60 | myb domain protein 305 |
| NR | XP_007144143.1 | 4.25E-128 | hypothetical protein PHAVU_007G132300g [Phaseolus vulgaris] |
| Swissprot | tr|P81391|MYB05_ANTMA | 4.00E-47 | Myb-related protein 305 |
| trEMBL | tr|V7BE96|V7BE96_PHAVU | 2.00E-128 | Uncharacterized protein {ECO:0000313|EMBL:ESW16137.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00266 | 126281 | 127647 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000266s00012631.1 | PF00249.26 | Myb_DNA-binding | 22 | 69 | 4.10E-17 |
| Glyur000266s00012631.1 | PF00249.26 | Myb_DNA-binding | 75 | 113 | 8.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.527 |
| SRR1783600 | control | 1.563 |
| SRR1783602 | moderate drought stress | 5.166 |
| SRR1811619 | moderate drought stress | 5.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.137 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.672 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.666 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.595 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.968 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.946 |
| SRR2967015 | Control (Tissue:root) | 2.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.431 |
| SRR9715742 | Root | 0.746 |
| SRR9715743 | Root | 1.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.208 |
| SRR8749028 | MeJA induced 9h | 0.366 |
| SRR8749029 | MeJA induced 9h | 0.062 |
| SRR8749030 | Uninduced | 0.210 |
| SRR8749031 | Uninduced | 0.095 |
| SRR8749032 | Uninduced | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.063 |
| SRR8400027 | Control-Root | 2.133 |